Welcome

SquiDBase (squidbase.org) is a dedicated database for storing and sharing raw nanopore sequencing data from microbial and viral research projects. By providing a centralized platform, SquiDBase improves data accessibility and encourages its reuse, fostering experimental research and the development of innovative analytical methods.

This guide will help you navigate how to use SquiDBase for retrieving and uploading data. We encourage contributions and are more than happy to assist with data uploads—feel free to reach out to us at (squidbase@uantwerpen.be)

Terms and conditions

Please also review our Terms & Conditions.

Acknowledgements & citation

SquiDBase was developed at the University of Antwerp in the Laukens lab.

You can find the team members who contributed to the development, curation, and expansion of SquiDBase on the landing page of our website: SquiDBase Team.

A publication is currently in preparation. In the meantime, please cite the SquiDBase poster presentation.